FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH651.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH651.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3685
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA193552.51017639077341No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT96526.187245590230663No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC812.198100407055631No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC461.248303934871099No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAAAC360.9769335142469471No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC320.8683853459972863No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC180.48846675712347354No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG170.46132971506105835No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA130.35278154681139756No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA120.3256445047489823No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA110.2985074626865672No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA100.27137042062415195No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA90.24423337856173677No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT90.24423337856173677No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT90.24423337856173677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA90.24423337856173677No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA80.21709633649932158No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA80.21709633649932158No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT80.21709633649932158No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAA70.18995929443690637No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA70.18995929443690637No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT70.18995929443690637No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA70.18995929443690637No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT60.16282225237449116No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT60.16282225237449116No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA60.16282225237449116No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.16282225237449116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA60.16282225237449116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG60.16282225237449116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA60.16282225237449116No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAAAC60.16282225237449116No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC50.13568521031207598No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT50.13568521031207598No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT50.13568521031207598No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT50.13568521031207598No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA50.13568521031207598No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA40.10854816824966079No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAA40.10854816824966079No Hit
CGGAAGGATCATTCCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAACCGTATCAAA40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA40.10854816824966079No Hit
CGGAAGGATCATTACCACACTAAAAACAATCCACGTGAACCGTCAGAAAT40.10854816824966079No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA40.10854816824966079No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT40.10854816824966079No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.10854816824966079No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA40.10854816824966079No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)