FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH649.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH649.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3760
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC278974.17553191489363No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA1584.202127659574468No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC631.675531914893617No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC561.4893617021276597No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC491.303191489361702No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA330.8776595744680852No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA290.7712765957446809No Hit
CGGAAGGATCATTACCACACCAAACAACATCCACGTGAACCGATTTATGG180.4787234042553191No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC170.45212765957446804No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC150.39893617021276595No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA150.39893617021276595No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT150.39893617021276595No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC140.37234042553191493No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT130.3457446808510638No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA130.3457446808510638No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC130.3457446808510638No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC120.3191489361702127No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC110.2925531914893617No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC90.23936170212765956No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC90.23936170212765956No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC90.23936170212765956No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA90.23936170212765956No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC80.2127659574468085No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC80.2127659574468085No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATGAAC80.2127659574468085No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTCTGCTAATCTC70.18617021276595747No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC70.18617021276595747No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC70.18617021276595747No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC70.18617021276595747No Hit
CGGGAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15957446808510636No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC60.15957446808510636No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15957446808510636No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15957446808510636No Hit
CGGAAGGATCATTAACACACATAAAAACTTTCCACGTGAACCGTATCAAC50.13297872340425532No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC50.13297872340425532No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC50.13297872340425532No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCGACCACAGCAGTGGATGTCTAGGCTCTGT40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC40.10638297872340426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC40.10638297872340426No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)