FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH639.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH639.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3072
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA85727.897135416666668No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA68122.16796875No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA45914.94140625No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA2337.584635416666667No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1795.826822916666666No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTATCAA240.78125No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATTC210.68359375No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT190.6184895833333333No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATCC180.5859375No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT180.5859375No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC160.5208333333333333No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC130.4231770833333333No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA130.4231770833333333No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT130.4231770833333333No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAC110.35807291666666663No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGCGAACCGTTGTAA100.32552083333333337No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA90.29296875No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA90.29296875No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA90.29296875No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAA80.26041666666666663No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA70.22786458333333334No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA70.22786458333333334No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA60.1953125No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA60.1953125No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCACGTGAACTGTATCAAA60.1953125No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA60.1953125No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA60.1953125No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA50.16276041666666669No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA50.16276041666666669No Hit
CGGAAGGATCATTACCACACCAAAAAACTTCCACGTGAACTGTATCAAAA40.13020833333333331No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC40.13020833333333331No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA40.13020833333333331No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA40.13020833333333331No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA40.13020833333333331No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT40.13020833333333331No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA40.13020833333333331No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)