FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH630.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH630.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5590
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC481686.15384615384616No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC641.144901610017889No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC571.0196779964221825No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC550.9838998211091234No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAC240.4293381037567084No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC220.3935599284436494No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC220.3935599284436494No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC200.35778175313059035No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC190.33989266547406083No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC190.33989266547406083No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC170.3041144901610018No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA150.26833631484794274No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC140.25044722719141327No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC110.1967799642218247No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC100.17889087656529518No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA100.17889087656529518No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT90.16100178890876565No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC90.16100178890876565No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC90.16100178890876565No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.16100178890876565No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC80.14311270125223613No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC80.14311270125223613No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC80.14311270125223613No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC80.14311270125223613No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC80.14311270125223613No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC70.12522361359570663No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC70.12522361359570663No Hit
CGAAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC70.12522361359570663No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC60.1073345259391771No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC60.1073345259391771No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)