FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH628.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH628.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4279
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC188143.958868894601544No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT62014.48936667445665No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA51812.105632157046038No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT2315.3984575835475574No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC1934.51039962608086No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1473.435382098621173No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC350.817948118719327No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA340.7945781724702033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAGC130.30380930123860717No Hit
CGGAAGGATCATTACCACACATAAAAACTTCCCCCGTGAACCGTATCAAC130.30380930123860717No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC130.30380930123860717No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAGCCGTATCAAC120.2804393549894835No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT100.23369946249123624No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCGAC100.23369946249123624No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA100.23369946249123624No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCCCGTGAACCGTATCAAC90.21032951624211263No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGGACCGTATCAAC90.21032951624211263No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAAACGTATCAAC80.18695956999298902No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGCGAACCGTATCAAC80.18695956999298902No Hit
CGGAAGGATCATTACCACACCTAAAAACTCCCCCCGTGAACCGTATCAAC80.18695956999298902No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACC70.1635896237438654No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA70.1635896237438654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTACCAAC70.1635896237438654No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC70.1635896237438654No Hit
CGGAAGGATCATACCACACCTAAAAACTTCCCCCGTGAACCGTATCAACC60.14021967749474176No Hit
CGGAAGGATCATTACCACACCTAAAAACCTCCCCCGTGAACCGTATCAAC60.14021967749474176No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCTGTGAACCGTATCAAC60.14021967749474176No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTCCCCCGTGAACCGTATCAAC60.14021967749474176No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC50.11684973124561812No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT50.11684973124561812No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGCATCAAC50.11684973124561812No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT50.11684973124561812No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTCCCCCGTGAACCGTATCAAC50.11684973124561812No Hit
CGGAAGGATCATTACCACACCTAAAGACTTCCCCCGTGAACCGTATCAAC50.11684973124561812No Hit
TGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC50.11684973124561812No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA50.11684973124561812No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTGTCAAC50.11684973124561812No Hit
CGGAAGGATCATTACCACCTAAAAACTTCCCCCGTGAACCGTATCAACCC50.11684973124561812No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATCAA50.11684973124561812No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)