FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH626.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH626.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6565
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT573087.28103579588729No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT650.9900990099009901No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC540.8225437928408226No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT390.594059405940594No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT340.5178979436405179No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT340.5178979436405179No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT230.3503427265803503No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT230.3503427265803503No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT190.2894135567402894No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT180.2741812642802742No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG170.25894897182025894No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT160.2437166793602437No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT160.2437166793602437No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT130.19801980198019803No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT130.19801980198019803No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT120.18278750952018277No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCATGTGAACCACTTTGTAT110.16755521706016757No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT110.16755521706016757No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT110.16755521706016757No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT110.16755521706016757No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT100.15232292460015232No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT100.15232292460015232No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT100.15232292460015232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT100.15232292460015232No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT90.1370906321401371No Hit
CGGAAGGATCATTACTACACCAAAAACTATCCACGTGAACCACTTTGTAT80.12185833968012184No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT80.12185833968012184No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT80.12185833968012184No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT80.12185833968012184No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT70.10662604722010663No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT70.10662604722010663No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC70.10662604722010663No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT70.10662604722010663No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT70.10662604722010663No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT70.10662604722010663No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT70.10662604722010663No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT70.10662604722010663No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)