FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH625.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH625.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3294
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC102731.177899210686093No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC51815.725561627200971No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA36511.080752884031572No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT3219.744990892531877No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA2698.16636308439587No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA461.3964784456587735No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC270.819672131147541No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTTGTA270.819672131147541No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGGACCGTTTGTAC180.546448087431694No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAAACGTTTGTAC170.5160898603521554No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTTTAATA160.4857316332726169No Hit
CGGAAGGATCATTACCACTGTCTCTTACAGCAGTGGATGTCTAGGCTCTG160.4857316332726169No Hit
CGGAAGGATCATTAACACACCTTAAAACTATCCACGTGAACCGTTTGTAC160.4857316332726169No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAACC140.42501517911353975No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA130.3946569520340012No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA130.3946569520340012No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCATGTGAACCGTTCTAC130.3946569520340012No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTTGTACC120.36429872495446264No Hit
CGGAAGGATCATTACCACACATTAAAACTATCCACGTGAACCGTTTGTAC120.36429872495446264No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTAAGCA100.3035822707953855No Hit
CGGAAGGATCATTACCACACATAAAAAACTATCCACGTGAACCGTTAAGC100.3035822707953855No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAACCAA100.3035822707953855No Hit
CGGAAGGATCATTAACACACCTAAAAAACTATCCACGTGAACCGTTAAGC90.273224043715847No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT80.24286581663630846No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCACTTTGT80.24286581663630846No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT80.24286581663630846No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT70.21250758955676988No Hit
CGGAAGGATCATTAACACGCCAAAAACTATCCACGTGAACCGTTAAGCAA70.21250758955676988No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCACTTTGTA70.21250758955676988No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT70.21250758955676988No Hit
CGGAAGGATCATTAACACGCCAAAAACTATCCACGTGAACCGTTAACCAA60.18214936247723132No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAAGCAA60.18214936247723132No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT60.18214936247723132No Hit
CGGAAGGATCATTACCACACCTTAAAACTAACCACGTGAACCGTTTGTAC60.18214936247723132No Hit
CGGAAGGATCATTACCACGCCAAAAACTATACACGTGAACCGTTAACCAA60.18214936247723132No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTGTAAC60.18214936247723132No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGCTTGTAC50.15179113539769276No Hit
CGGAAGGATCATTACCACGCCAAAAACTATACACGTGAACCGTTAAGCAA50.15179113539769276No Hit
CGGAAGGATCATTACCACACCTTAAAAATATCCACGTGAACCGTTTGTAC50.15179113539769276No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGCGAACCGTTTGTAC50.15179113539769276No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT40.12143290831815423No Hit
CGGAAGGATCATTACCACACCTTAAAGCTATCCACGTGAACCGTTTGTAC40.12143290831815423No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACAGTTAAGC40.12143290831815423No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCGCGTGAACCGTTTGTAC40.12143290831815423No Hit
CGGAAGGATCATTACCACGCCAAAAACTATACACGTGAACCGTTAATCAA40.12143290831815423No Hit
CGGAAGGATTATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC40.12143290831815423No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT40.12143290831815423No Hit
CGGAAGGATCATTACCACGCCTTAAAACTATCCACGTGAACCGTTTGTAC40.12143290831815423No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTGC40.12143290831815423No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)