FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH620.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH620.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6950
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC255036.69064748201439No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC142120.446043165467625No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT84912.215827338129497No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC2163.107913669064748No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT2143.079136690647482No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1982.8489208633093526No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA1722.474820143884892No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT891.2805755395683454No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC330.47482014388489213No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC270.3884892086330935No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC230.33093525179856115No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC210.302158273381295No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC200.28776978417266186No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC180.2589928057553957No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT170.2446043165467626No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC170.2446043165467626No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC160.23021582733812948No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC150.2158273381294964No Hit
CGGAAGGATCATTACCACACATAAAAACTTCCCCCGTGAACCGTATCAAC140.2014388489208633No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC140.2014388489208633No Hit
CGGAAGGATCATTACCACATCTAAAAACTTTCCACGTGAACCGTATCAAC130.18705035971223022No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC130.18705035971223022No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTACCAAC130.18705035971223022No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC130.18705035971223022No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCAACGTGAACCGTATCAAC120.17266187050359713No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAAACGTATCAAC110.15827338129496404No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT100.14388489208633093No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTATCAA100.14388489208633093No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAGC90.12949640287769784No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC90.12949640287769784No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC90.12949640287769784No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG90.12949640287769784No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT90.12949640287769784No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT80.11510791366906474No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCCCGTGAACCGTATCAAC80.11510791366906474No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC80.11510791366906474No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC70.10071942446043165No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCGAC70.10071942446043165No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC70.10071942446043165No Hit
CGGAAGGATCATTACCACACCTAAAAACTCCCCCCGTGAACCGTATCAAC70.10071942446043165No Hit
CGGAAGGATCATTACCACCTAAAAACTTCCCCCGTGAACCGTATCAACCC70.10071942446043165No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)