FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH610.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH610.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1763
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA78744.63981849120817No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT25714.577424844015882No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA18810.663641520136132No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAATA1458.224617129892229No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT160.9075439591605219No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT160.9075439591605219No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAAGCAA160.9075439591605219No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC140.7941009642654565No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.6806579693703914No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA120.6806579693703914No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTTAATAT100.5672149744753261No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACAGTTAACCAA100.5672149744753261No Hit
CGGAAGGATCATTACCACCTAAAACTATCCACGTGAACCGTTAACCAAAC90.5104934770277936No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAGCCGTTAACCAA70.39705048213272826No Hit
CGGAAGGATCATTACCACACCTAAAACTATACACGTGAACCGTTAACCAA70.39705048213272826No Hit
CGGAAGGATCATTACCACACATAAAACTATCCACGTGAACCGTTAACCAA50.28360748723766305No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG50.28360748723766305No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCGCGTGAACCGTTAACCAA50.28360748723766305No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAACCA40.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAGACTATCCACGTGAACCGTTAACCAA40.22688598979013047No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACTGTTAAGCA40.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTAACCAA40.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTTTAATA40.22688598979013047No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT40.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAACA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTTTAATA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGGACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCCCACCTAAAACTATCCACGTGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACCATCCACGTGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT30.17016449234259784No Hit
CGGAAGGATCATTAACACACCTAAAACTATCCACGTGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT30.17016449234259784No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAGCA30.17016449234259784No Hit
CGGAAGGTCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTTTAATA30.17016449234259784No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACTACCCACGTGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGCGAACCGTTAACCAA30.17016449234259784No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT20.11344299489506524No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAGCA20.11344299489506524No Hit
CGGAAGGATCATTACCCCACCAAAAAACTATCCACGTGAACCGTTAAGCA20.11344299489506524No Hit
TGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAG20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTCAACCAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTTAATA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAGCA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT20.11344299489506524No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT20.11344299489506524No Hit
CGGAAGGATTATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTAAACCGTTAACCAA20.11344299489506524No Hit
CGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTATCAACA20.11344299489506524No Hit
CGGAAGGATCATTAACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA20.11344299489506524No Hit
CGGAAGGATCATTCCACACCTAAAACTATCCACGTGAACCGTTAACCAAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTGACCAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAGAACTATCCACGTGAACCGTTAACCAA20.11344299489506524No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTTTAATA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAGCCAA20.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAACTATCTACGTGAACCGTTAACCAA20.11344299489506524No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)