FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH608.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH608.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1840
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT152382.77173913043478No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT170.9239130434782609No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT130.7065217391304348No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG120.6521739130434783No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT120.6521739130434783No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT110.5978260869565217No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT110.5978260869565217No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT100.5434782608695652No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT80.43478260869565216No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT70.3804347826086957No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT70.3804347826086957No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT70.3804347826086957No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT60.32608695652173914No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT60.32608695652173914No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT60.32608695652173914No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT60.32608695652173914No Hit
CGGAAGGATCATTATCACACCAAAAACAATCCACGTGAACCGTCAGAAAT50.2717391304347826No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT50.2717391304347826No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT50.2717391304347826No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT50.2717391304347826No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT40.21739130434782608No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT40.21739130434782608No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT40.21739130434782608No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA40.21739130434782608No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT40.21739130434782608No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.21739130434782608No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAATCGTCAGAAAT30.16304347826086957No Hit
CGGAGGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.16304347826086957No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA30.16304347826086957No Hit
CGGAAGGATCATTACCGCACCAAAAACAATCCACGTGAACCGTCAGAAAT30.16304347826086957No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACTACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAAACAATTCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCTCGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCGTTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACAGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA20.10869565217391304No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAT20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAATCAATCCACGTGAACCGTCAGAAAT20.10869565217391304No Hit
CGGAAATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATAG20.10869565217391304No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT20.10869565217391304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)