FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH603.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH603.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5289
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC266850.44431839667234No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA125423.709585933068634No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC3546.693136698808849No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC330.6239364719228588No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA270.5104934770277936No Hit
CGGAAGGATCATTAACACACCTAAAACTTTCCACGTGAACCGTATCAAAC220.41595764794857254No Hit
CGGAAGGATCATTACCACACCTAAAGCTTTCCACGTGAACCGTATCAAAC220.41595764794857254No Hit
CGGAAGGATCATTACCACCTAAAACTTTCCACGTGAACCGTATCAAACAA210.39705048213272826No Hit
CGGAAGGATCATTACCACACATAAAACTTTCCACGTGAACCGTATCAAAC200.37814331631688414No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGAGTACGATCTC180.3403289846851957No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGCGAACCGTATCAAAC170.3214218188693515No Hit
CGGAAGGATCATTACCACACCTAAAACTTTACACGTGAACCGTATCAAAC170.3214218188693515No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA160.3025146530535073No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAGCCGTATCAAAC160.3025146530535073No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAA150.28360748723766305No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCGCGTGAACCGTATCAAAC140.2647003214218189No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTACCAAAC140.2647003214218189No Hit
CGGAAGGATCATTACCACACCCAAAACTTTCCACGTGAACCGTATCAAAC120.22688598979013047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT120.22688598979013047No Hit
CGGAAGGATCATTACCACGCCTAAAACTTTCCACGTGAACCGTATCAAAC120.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAGC120.22688598979013047No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGCATCAAAC120.22688598979013047No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC110.20797882397428627No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGGACCGTATCAAAC110.20797882397428627No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA110.20797882397428627No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACAGTATCAAAC110.20797882397428627No Hit
CGGAAGGATCATTACCACACCTAAAACTTCCCACGTGAACCGTATCAAAC100.18907165815844207No Hit
CGGAAGGATTATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC100.18907165815844207No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA90.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACCTTCCACGTGAACCGTATCAAAC90.17016449234259784No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA90.17016449234259784No Hit
CGGAAGGATCATTACCACACCTAAAACTCTCCACGTGAACCGTATCAAAC80.15125732652675364No Hit
CGGAAGGATCATTACCCCACCTAAAACTTTCCACGTGAACCGTATCAAAC80.15125732652675364No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAGAC80.15125732652675364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA80.15125732652675364No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAAAC80.15125732652675364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA80.15125732652675364No Hit
CGGAAGGATCATTACCACACCTAAACTTTCCACGTGAACCGTATCAAACA70.13235016071090944No Hit
CGGAAGGATCATTACCACACCTAAGACTTTCCACGTGAACCGTATCAAAC70.13235016071090944No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCATGTGAACCGTATCAAAC70.13235016071090944No Hit
CGGAAGGATCATTACCACACCTAGAACTTTCCACGTGAACCGTATCAAAC70.13235016071090944No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTGTCAAAC70.13235016071090944No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCGAAC60.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA60.11344299489506524No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT60.11344299489506524No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA60.11344299489506524No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)