FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH597.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH597.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4569
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA183440.14007441453272No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA160635.14992339680455No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT2074.530531845042679No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA220.4815057999562267No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCACGTGAACTGTATCAAA220.4815057999562267No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGATGTATCAAAAC160.3501860363318013No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA160.3501860363318013No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA150.3282994090610637No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG140.3064127817903261No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA140.3064127817903261No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA140.3064127817903261No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA130.2845261545195885No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA130.2845261545195885No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAAAAC130.2845261545195885No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA130.2845261545195885No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAA120.2626395272488509No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA120.2626395272488509No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC120.2626395272488509No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC110.24075289997811336No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATCAAA100.2188662727073758No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATCAAA100.2188662727073758No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATCAAA100.2188662727073758No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA100.2188662727073758No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA100.2188662727073758No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATCAAA90.1969796454366382No Hit
CGGAAGGATCATTACCACCTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA90.1969796454366382No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA90.1969796454366382No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATCAAA90.1969796454366382No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAGA90.1969796454366382No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT90.1969796454366382No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTCAAA90.1969796454366382No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA90.1969796454366382No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTCCACGTGAACTGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATCAAA80.17509301816590064No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA70.15320639089516305No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATCAAA70.15320639089516305No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATCAAA70.15320639089516305No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA70.15320639089516305No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA70.15320639089516305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA60.13131976362442546No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT60.13131976362442546No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA60.13131976362442546No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTACCAAA60.13131976362442546No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA60.13131976362442546No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA60.13131976362442546No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCTACGTGAACTGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTCCACGTGAACTGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA50.1094331363536879No Hit
CAGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGCAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTCCACGTGAACTGTATCAAA50.1094331363536879No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCGAA50.1094331363536879No Hit
CGGAAGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAAA50.1094331363536879No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)