FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH596.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH596.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1558
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA36123.170731707317074No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA25016.046213093709884No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC19912.77278562259307No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC1207.702182284980745No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG1107.060333761232348No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA986.290115532734275No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC291.8613607188703467No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTGTAA171.0911424903722722No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA130.8344030808729139No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT110.7060333761232349No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA100.6418485237483954No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA100.6418485237483954No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA90.5776636713735559No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT90.5776636713735559No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTATCAA80.5134788189987163No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA70.4492939666238768No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA70.4492939666238768No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTATCAA70.4492939666238768No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA60.38510911424903727No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC60.38510911424903727No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCAAAA50.3209242618741977No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA40.25673940949935814No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAGCCGTATCAAC40.25673940949935814No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA40.25673940949935814No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT40.25673940949935814No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTTCCACGTGAACCGTTGTAA30.19255455712451863No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAAACCATCCACGTGAACCGTCAAAA30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT30.19255455712451863No Hit
CGGAAGGATCATTACCACACCTAAAGACTTCCCCCGTGAACCGTATCAAC30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCGTAA30.19255455712451863No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA30.19255455712451863No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC30.19255455712451863No Hit
CGGAAGGATCATTACCACACCAAAAAAACTGTCCACGTGAACCGTCAAAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGTAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTATCCACGTGAACCGTCAAAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGCTGTAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACTGTCGTTA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAGC20.12836970474967907No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA20.12836970474967907No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATAACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAAACGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAACTTCCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACATAAAAACTTCCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTTCCACGTGAACCGTTGTAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTCAAAT20.12836970474967907No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTGTAACT20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCCCGTGAACCGTATCAAC20.12836970474967907No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTG20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAACC20.12836970474967907No Hit
CGGAAGGATCATTACCACACCGAAAAAACTATCCACGTGAACCGTCAAAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCCCGTGAACCGTATCAA20.12836970474967907No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAACCAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTAAAAA20.12836970474967907No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGCGAACCGTTGTAA20.12836970474967907No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)