FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH588.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH588.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA4241.17647058823529No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG109.803921568627452No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA76.862745098039216No Hit
CGGAAGGATCATTACCACCGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT54.901960784313726No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT43.9215686274509802No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTGTAA43.9215686274509802No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA32.941176470588235No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC21.9607843137254901No Hit
GATGAGTCAGCGTCGAACATGTTCACTATGTTGCGGTTACTCACTGTCTC10.9803921568627451No Hit
CGGAAGGATCATTGCCACACCAAAAAAACTATCCACGTGAACCGTTGTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCACAAAT10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC10.9803921568627451No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA10.9803921568627451No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.9803921568627451No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTATCA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACACGTACAGCTGTGCTG10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAATCTGTACTG10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT10.9803921568627451No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTACAAT10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA10.9803921568627451No Hit
CGGCCCGCGATGTATATCGGCGATACCGACGACGGGTCGGGGCTGCACCA10.9803921568627451No Hit
CGGAAGGTCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAAC10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTTCCACGTGAACCGTTGTAA10.9803921568627451No Hit
CGGAAGGATCATTATCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTTAACCGTTTTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCGTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTACAA10.9803921568627451No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA10.9803921568627451No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTG10.9803921568627451No Hit
CGGAAGGATCATTACCACCGACAGCAGTGGATGTCTAGGCTTTGTCTCTT10.9803921568627451No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)