FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH581.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH581.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT39383.61702127659575No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT194.042553191489362No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT51.0638297872340425No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT51.0638297872340425No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT30.6382978723404255No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.425531914893617No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT20.425531914893617No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT20.425531914893617No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT20.425531914893617No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT20.425531914893617No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT20.425531914893617No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT20.425531914893617No Hit
GGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA10.2127659574468085No Hit
AGCCCCGGTATGTATATCGGCTCGACCGGGGAGCGGGGACTGCATCACCT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAATCTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.2127659574468085No Hit
CGGAAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTA10.2127659574468085No Hit
CGGAAGGAACATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT10.2127659574468085No Hit
CGGAAGGAGCATTACCACACCAAAAACTATCCACGTGAACAAATTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTGGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGGAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTGTATT10.2127659574468085No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCAATTTGTAT10.2127659574468085No Hit
CGGAATGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT10.2127659574468085No Hit
AGCCCCGCTATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACACTCCACGTGAACCACGTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT10.2127659574468085No Hit
CGGAAGGATCATTACCATACCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
AGTCCAGCAATGTATATCGGGTCCACCGGACCGCGCGGACTGCACCACCT10.2127659574468085No Hit
CGGAAGGATCATTAACCCACCAAAAAAAACTTACCACGTGAAACTGTACT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT10.2127659574468085No Hit
CCGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
AGGAAGGATCATTACCAAAACAAAAAATATCCAGGTGAAAGAATGGGGAT10.2127659574468085No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT10.2127659574468085No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT10.2127659574468085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)