FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH578.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH578.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1630
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC81550.0No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT38523.619631901840492No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT533.2515337423312882No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATAAG503.067484662576687No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGAGAGTTATCTC251.5337423312883436No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC120.7361963190184049No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATCAA80.49079754601227No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT70.4294478527607362No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.4294478527607362No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA70.4294478527607362No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC70.4294478527607362No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC60.36809815950920244No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC60.36809815950920244No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCACTTTGT60.36809815950920244No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT60.36809815950920244No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC50.3067484662576687No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC50.3067484662576687No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.245398773006135No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC40.245398773006135No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC40.245398773006135No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT40.245398773006135No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC40.245398773006135No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT40.245398773006135No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC40.245398773006135No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC40.245398773006135No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC30.18404907975460122No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT30.18404907975460122No Hit
CGGAAGGACCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.18404907975460122No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.18404907975460122No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA30.18404907975460122No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC30.18404907975460122No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT30.18404907975460122No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT30.18404907975460122No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT30.18404907975460122No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT30.18404907975460122No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC30.18404907975460122No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAC30.18404907975460122No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC20.1226993865030675No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT20.1226993865030675No Hit
CGGAAAGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT20.1226993865030675No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC20.1226993865030675No Hit
CGGAAGGAGCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT20.1226993865030675No Hit
CGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA20.1226993865030675No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG20.1226993865030675No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC20.1226993865030675No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGGAT20.1226993865030675No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA20.1226993865030675No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT20.1226993865030675No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)