FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve869.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve869.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1393
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT50.3589375448671931No Hit
AGGCCGGGAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGACCGGGAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGTCCAGGTATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
CGGCCGGGGATGTACATCGGCTCGACCGGTGAGCGCGGCCTGCACCACCT20.14357501794687724No Hit
CGGCCGGCGATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGGCCGGGGATGTACATCGGGTCGACGGGCGAGCGCGGCCTGCACCACCT20.14357501794687724No Hit
AGGCCGGGCATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGCCCTGGTATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGACCTGGGATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.14357501794687724No Hit
AGGCCGGGGATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
CGGCCTGGTATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGGCCGGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGCCCCGCAATGTACATCGGCTCGACTGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
CGGCCGGGGATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGGCCAGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.14357501794687724No Hit
AGCCCGGCGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.14357501794687724No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)