FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve280.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve280.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1726
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.17381228273464658No Hit
AGACCGGCTATGTATATTGGCGACACCTCCGACGGCACCGGCTTGCACCA20.11587485515643105No Hit
CGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGCCCCGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCAGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGTCCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGACCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCAGGTATGTACATTGGGGACACCGACGACGGGTCGGGTCTCCACCA20.11587485515643105No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.11587485515643105No Hit
AGGCCAGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGTCCGGGGATGTATATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.11587485515643105No Hit
CGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCGGGTATGTACATTGGCGACACCGACGACGGTTCAGGCCTCCACCA20.11587485515643105No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGACCGGGTATGTATATCGGCGATACCGACGATGGATCGGGCCTGCACCA20.11587485515643105No Hit
AGGCCAGGCATGTACATTGGGGACACCGACGACGGGTCGGGTCTCCACCA20.11587485515643105No Hit
AGGCCCGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGTCCTGCGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGTCCAGGAATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.11587485515643105No Hit
AGTCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.11587485515643105No Hit
AGTCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGACCGGGGATGTATATCGGCGGCACCGACGAAAAGGCGATGCACCACCT20.11587485515643105No Hit
CGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGTCCCGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCGGCTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
CGGCCGGCTATGTATATTGGGGACACCGACGACGGGTCGGGTCTCCACCA20.11587485515643105No Hit
AGCCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit
AGCCCAGGGATGTACATTGGCGACACCGACGACGGCTCCGGCCTCCACCA20.11587485515643105No Hit
CGGCCCGGAATGTACATCGGGGACACCGACGACGGGTCGGGTCTCCACCA20.11587485515643105No Hit
AGACCGGCGATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCACCA20.11587485515643105No Hit
AGGCCCGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11587485515643105No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)