FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve278.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve278.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1316
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA40.303951367781155No Hit
AGGCCCGGGATGTACATAGGCGATACCGACGACGGTTCCGGTCTGCACCA20.1519756838905775No Hit
AGACCCGCAATGTATATCGGCGATACCGACGACGGTTCCGGTCTGCACCA20.1519756838905775No Hit
AGCCCGGGCATGTACATCGGCTCCACCGACTCCCGCGGCCTGATGCACTG20.1519756838905775No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.1519756838905775No Hit
AGGCCGGGGATGTATATTGGCTCGACGGGCCCGCGCGGTCTGCACCACCT20.1519756838905775No Hit
CGACCAGGTATGTACATCGGCGGCACGGACGAAAAAGCGCTGCATCACCT20.1519756838905775No Hit
AGGCCGGGCATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.1519756838905775No Hit
CGGCCTGGCATGTATATTGGCGGCACGGACGAAAAAGCGCTGCATCACCT20.1519756838905775No Hit
CGTCCAGGCATGTACATCGGCGGCACGGACGAAAAAGCGCTGCATCACCT20.1519756838905775No Hit
AGACCAGGTATGTACATTGGCGATACCGACGACGGTTCCGGTCTGCACCA20.1519756838905775No Hit
CGGCCGGGCATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.1519756838905775No Hit
CGGCCTGGTATGTACATCGGATCCACCGACTCGCGCGGGCTCATGCACTG20.1519756838905775No Hit
AGGCCGGGTATGTATATAGGGTCCACCGGTCCACGTGGTCTGCACCACCT20.1519756838905775No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.1519756838905775No Hit
AGACCGGGTATGTATATCGGCGGCACGGACGAAAAAGCGCTGCATCACCT20.1519756838905775No Hit
CGGCCGGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA20.1519756838905775No Hit
CGGCCTGCGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.1519756838905775No Hit
AGGCCGGGTATGTATATCGGCGGCACGGACGAAAAAGCGCTGCATCACCT20.1519756838905775No Hit
AGGCCGGGTATGTATATTGGCGATACCTCGGATGGCACCGGCCTGCACCA20.1519756838905775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)