FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve277.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve277.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3944
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG110.2789046653144016No Hit
AGGCCCGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.2028397565922921No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.2028397565922921No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGACCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGGCCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.15212981744421905No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGGCCTGCAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGGCCGGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.12677484787018256No Hit
AGGCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGGCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
CGCCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
CGTCCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
CGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
CGTCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
CGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGACCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGTCCCGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGCCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGTCCAGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12677484787018256No Hit
AGACCAGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCGGCCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGCCCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCCGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCGGGAATGTACATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT40.10141987829614604No Hit
CGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCTGGAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCCGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCAGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCTGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCAGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGCCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCTGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGACCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGGCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
AGTCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit
CGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10141987829614604No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)