FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve269.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve269.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1545
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.2588996763754045No Hit
AGGCCCGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.2588996763754045No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.1941747572815534No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.1941747572815534No Hit
CGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.1941747572815534No Hit
AGGCCAGGCATGTATATAGGCGATACCGACGACGGATCGGGCCTCCACCA30.1941747572815534No Hit
AGGCCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.1941747572815534No Hit
CGTCCTGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.1941747572815534No Hit
AGGCCGGGGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA20.12944983818770225No Hit
AGCCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCTGCGATGTATATTGGCGATACCGACGACGGATCGGGCCTCCACCA20.12944983818770225No Hit
AGACCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCCGCCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCCGGGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA20.12944983818770225No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCGGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCGGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGTCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCGGGGATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.12944983818770225No Hit
AGGCCTGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGCCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGTCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGTCCAGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGCCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCGGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGCCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGTCCAGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGACCCGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGTCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGCCCCGCAATGTACATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.12944983818770225No Hit
CGGCCAGGCATGTACATTGGCTCCACGGGCGAGCGGGGCCTGCACCACCT20.12944983818770225No Hit
AGGCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCCGGTATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA20.12944983818770225No Hit
AGTCCGGGTATGTATATCGGCTCGACTGGAGAGCGTGGTCTGCACCACCT20.12944983818770225No Hit
CGACCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGACCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGCCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGCCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGGCCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGCCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
CGCCCGGGAATGTATATTGGCGACACCGACGACGGCTCCGGCCTCCACCA20.12944983818770225No Hit
AGACCGGGAATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.12944983818770225No Hit
AGACCTGGGATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA20.12944983818770225No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)