FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve268.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve268.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2979
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.13427324605572338No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.13427324605572338No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.13427324605572338No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.13427324605572338No Hit
AGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGCCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
CGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGGCCGGGTATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA30.10070493454179255No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGGCCTGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit
AGTCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.10070493454179255No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)