FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve267.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve267.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5701
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.2104893878266971No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.17540782318891424No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.17540782318891424No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.15786704087002282No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.15786704087002282No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.15786704087002282No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.15786704087002282No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1403262585511314No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1403262585511314No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1403262585511314No Hit
AGTCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1403262585511314No Hit
AGTCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1403262585511314No Hit
AGGCCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
CGGCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGGCCAGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
CGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.12278547623223997No Hit
AGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGCCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGCCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGACCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGTCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGTCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGTCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGACCAGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGACCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
AGCCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit
CGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.10524469391334855No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)