FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve266.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve266.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4150
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.2891566265060241No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.24096385542168677No Hit
CGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.21686746987951808No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.21686746987951808No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.21686746987951808No Hit
AGTCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.19277108433734938No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.19277108433734938No Hit
AGGCCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.19277108433734938No Hit
AGCCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.19277108433734938No Hit
AGTCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGCCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGACCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGACCTGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
CGGCCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGACCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
CGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
CGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGGCCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.1686746987951807No Hit
AGTCCTGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT60.14457831325301204No Hit
CGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGACCGGGGATGTACATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT60.14457831325301204No Hit
AGGCCCGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCGGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCGGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGTCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGTCCCGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.14457831325301204No Hit
CGCCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCAGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCCGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCCGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCTGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCAGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGCCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGCCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGCCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGTCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCCGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGTCCTGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCTGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGGATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.12048192771084339No Hit
AGGCCGGCGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGTCCGGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGGCCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGGCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
CGGCCCGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGGCCGGGCATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGTCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit
AGACCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.12048192771084339No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)