FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve264.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve264.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1738
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT50.28768699654775604No Hit
AGACCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.17261219792865362No Hit
CGGCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGACCAGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCAGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCCGGTATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.11507479861910241No Hit
AGACCTGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGTCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGACCAGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGACCCGCCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGTCCAGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCGGCAATGTACATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.11507479861910241No Hit
CGGCCGGGGATGTACATCGGCTCCACCGGCGAGCGCGGTCTGCACCACCT20.11507479861910241No Hit
AGACCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit
CGCCCAGCAATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.11507479861910241No Hit
AGTCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.11507479861910241No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)