FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve263.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve263.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3774
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.18547959724430313No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1589825119236884No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.13248542660307366No Hit
AGGCCAGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.13248542660307366No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.13248542660307366No Hit
AGTCCGGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.13248542660307366No Hit
CGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.13248542660307366No Hit
AGGCCGGCAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGTCCCGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGACCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGTCCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGACCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGACCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGCCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGCCCCGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.10598834128245893No Hit
AGGCCTGGGATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT40.10598834128245893No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)