FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve262.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve262.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2058
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCTGGCATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT40.1943634596695821No Hit
AGGCCTGCTATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
AGGCCCGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
CGTCCGGGCATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
AGGCCAGGAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
AGTCCTGGGATGTACATCGGCGACACCGACGACGGTTCCGGCCTCCACCA30.1457725947521866No Hit
AGACCTGGTATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
AGGCCGGGGATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit
AGACCAGGCATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.1457725947521866No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)