FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve260.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve260.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2370
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.29535864978902954No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.25316455696202533No Hit
AGGCCAGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.25316455696202533No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.25316455696202533No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.25316455696202533No Hit
CGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGCCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGCCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGGCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.21097046413502107No Hit
AGGCCAGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
CGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
CGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGCCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGACCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCGGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT40.16877637130801687No Hit
AGTCCAGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGTCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGTCCTGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG40.16877637130801687No Hit
AGGCCTGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT30.12658227848101267No Hit
CGACCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCTGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGGCCTGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCTGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGTCCAGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCAGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGCCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGTCCAGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCTGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT30.12658227848101267No Hit
CGCCCTGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCAGGTATGTACATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT30.12658227848101267No Hit
CGTCCTGCTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT30.12658227848101267No Hit
AGGCCCGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCAGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT30.12658227848101267No Hit
AGTCCTGCCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGCCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGACCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCGGGAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCCGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCAGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCAGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCCGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGACCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGCCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
CGGCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGGCCGGCAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGTCCAGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGCCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit
AGACCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.12658227848101267No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)