FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve252.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve252.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3696
Sequences flagged as poor quality0
Sequence length301
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCGGGTATGTACATCGGCGATGTGCACGACGGCACCGGCCTGCACCA60.16233766233766234No Hit
CGGCCGGGGATGTACATCGGCGATGTGCACGACGGCACCGGCCTGCACCA50.13528138528138528No Hit
AGGCCGGGTATGTATATCGGCGATGTGCACGACGGCACCGGCCTGCACCA40.10822510822510822No Hit
AGGCCTGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
AGTCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
AGGCCGGGTATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
AGGCCGGCAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
AGACCGGGTATGTATATCGGCGATGTGCACGACGGCACCGGCCTGCACCA40.10822510822510822No Hit
AGGCCCGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
AGGCCTGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
CGTCCAGGGATGTACATCGGCGATGTGCACGACGGCACCGGCCTGCACCA40.10822510822510822No Hit
AGACCGGGCATGTATATTGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit
CGGCCTGGAATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA40.10822510822510822No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)