FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve240.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve240.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5141
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.23341762303053878No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19451468585878234No Hit
AGGCCTGCCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.17506321727290408No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13616028010114764No Hit
AGACCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13616028010114764No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13616028010114764No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13616028010114764No Hit
AGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGACCAGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGGCCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGACCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGGCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGGCCGGCCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit
CGACCAGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.11670881151526939No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)