FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve236.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve236.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1976
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCCGCAATGTATATCGGCGACACATCCGACGGCACCGGCCTGCACCA20.10121457489878542No Hit
CGACCGGCAATGTATATAGGCGACACCGACGACGGGTCGGGCCTGCATCA20.10121457489878542No Hit
AGGCCAGCAATGTACATCGGCGATACCGATGACGGATCGGGGCTGCACCA20.10121457489878542No Hit
AGACCTGGAATGTATATTGGCTCGACGGGTATCCGCGGCCTGCACCACCT20.10121457489878542No Hit
AGGCCCGGCATGTATATCGGCGACACATCCGACGGCACCGGCCTGCACCA20.10121457489878542No Hit
CGTCCAGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10121457489878542No Hit
AGGCCGGCTATGTACATCGGCTCCACCGGTGAGCGCGGCCTGCACCACCT20.10121457489878542No Hit
AGGCCTGGTATGTATATTGGGTCCACCGGTGAGCGCGGACTCCACCACCT20.10121457489878542No Hit
AGGCCAGGGATGTATATCGGGTCCACCGGCGAGCGCGGCCTGCACCACCT20.10121457489878542No Hit
CGGCCAGCGATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.10121457489878542No Hit
AGGCCGGGAATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.10121457489878542No Hit
AGACCTGGGATGTACATAGGCTCGACCGGTGAGCGCGGCCTGCACCACCT20.10121457489878542No Hit
AGGCCGGGGATGTATATCGGCGACACATCCGACGGCACCGGCCTGCACCA20.10121457489878542No Hit
AGTCCGGGGATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10121457489878542No Hit
AGTCCGGGAATGTATATCGGGTCCACCGGTGAGCGCGGACTCCACCACCT20.10121457489878542No Hit
CGACCTGCTATGTATATTGGCGATACCGACGACGGATCGGGCCTCCACCA20.10121457489878542No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)