FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve221.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve221.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1304
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGTATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT30.23006134969325154No Hit
AGGCCGGGCATGTACATTGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.15337423312883436No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.15337423312883436No Hit
AGGCCGGGCATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.15337423312883436No Hit
CGTCCTGGAATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.15337423312883436No Hit
AGGCCTGGTATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.15337423312883436No Hit
AGTCCTGCAATGTATATTGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.15337423312883436No Hit
CGGCCAGGTATGTATATCGGCTCGACCGGACCGCGCGGCCTGCACCACCT20.15337423312883436No Hit
AGTCCTGGGATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.15337423312883436No Hit
AGGCCTGGCATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.15337423312883436No Hit
AGCCCTGCCATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.15337423312883436No Hit
AGACCAGGCATGTATATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.15337423312883436No Hit
AGCCCCGCTATGTATATTGGCGATACCGACGACGGGTCGGGGCTGCACCA20.15337423312883436No Hit
AGTCCTGCGATGTATATTGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.15337423312883436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)