FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve197.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve197.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1847
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCCGCGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT30.16242555495397942No Hit
CGACCAGGTATGTATATTGGCGACACCGACGACGGCTCGGGCCTGCACCA30.16242555495397942No Hit
CGACCGGGAATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCGGGAATGTACATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCTGGGATGTATATCGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
AGGCCGGGAATGTACATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGTCCGGGGATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGACCGGCAATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGTCCGGCAATGTACATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCAGGGATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
AGGCCGGCAATGTACATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.10828370330265295No Hit
AGACCTGGTATGTACATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.10828370330265295No Hit
AGCCCGGGGATGTACATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.10828370330265295No Hit
AGACCAGGGATGTATATCGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
AGACCGGGGATGTATATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCGGGAATGTACATCGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
AGACCTGCGATGTACATCGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
CGGCCTGCGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGGCCGGGCATGTATATCGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
AGGCCTGCAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGACCGGGTATGTATATAGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCGGGAATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGGCCGGGCATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.10828370330265295No Hit
AGGCCAGGAATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
AGCCCCGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGTCCTGCCATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
CGGCCTGGTATGTATATCGGCGACACCGATGACGGCTCGGGGCTCCACCA20.10828370330265295No Hit
CGACCTGGTATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
CGGCCCGGCATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGTCCCGGGATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.10828370330265295No Hit
CGGCCGGGGATGTACATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGACCTGCAATGTACATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGTCCGGGTATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10828370330265295No Hit
AGGCCAGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
AGGCCGGCCATGTATATTGGCGACACAGACGACGGTTCCGGCCTCCACCA20.10828370330265295No Hit
AGACCAGCGATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGGCCTGGGATGTATATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit
CGCCCGGGGATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10828370330265295No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)