FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBDve196.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBDve196.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1864
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCCAGGAATGTATATCGGCGACACCGACGACGGATCGGGCCTCCACCA20.1072961373390558No Hit
AGGCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.1072961373390558No Hit
AGACCGGGGATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCACCA20.1072961373390558No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.1072961373390558No Hit
AGCCCTGGGATGTATATTGGCTCCACCGGCGAGCGCGGCCTGCACCACCT20.1072961373390558No Hit
AGACCTGGCATGTACATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.1072961373390558No Hit
AGGCCGGCGATGTATATCGGCGACACCTCCGACGGCACCGGCCTGCACCA20.1072961373390558No Hit
AGACCGGGAATGTATATTGGCAACACCGACGACGGCTCGGGCCTGCACCA20.1072961373390558No Hit
AGGCCGGGAATGTACATCGGCGATACCGACGATGGATCGGGCCTGCACCA20.1072961373390558No Hit
CGGCCGGGGATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA20.1072961373390558No Hit
CGGCCTGGGATGTACATCGGCGACACCGACGACGGCTCGGGCCTCCACCA20.1072961373390558No Hit
AGACCCGGGATGTATATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.1072961373390558No Hit
AGACCGGCTATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA20.1072961373390558No Hit
AGGCCGGGAATGTATATCGGCGATACCGACGATGGATCGGGCCTGCACCA20.1072961373390558No Hit
AGACCGGCAATGTATATCGGGGGTACGGACGAAAAGGCGCTGCACCATCT20.1072961373390558No Hit
AGACCTGGTATGTACATAGGCTCCACGGGTGAGCGCGGTCTGCACCACCT20.1072961373390558No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)