FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBChi186.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBChi186.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5100
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.27450980392156865No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.2352941176470588No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG110.2156862745098039No Hit
CGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.19607843137254902No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.17647058823529413No Hit
CGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.17647058823529413No Hit
AGGCCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.17647058823529413No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.17647058823529413No Hit
AGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGCCCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCAGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGTCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGACCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
CGACCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGTCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
AGGCCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1568627450980392No Hit
CGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
CGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCGGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
CGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGCCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGACCGGGCATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGTCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
CGCCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGACCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
CGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCAGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCAGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
AGGCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.13725490196078433No Hit
CGACCTGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCTGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCGGGGATGTATATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT60.1176470588235294No Hit
CGGCCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCTGCCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCCGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCCGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCAGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCAGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCTGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGCCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCTGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCCGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCTGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCCGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
CGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCAGCTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit
AGTCCAGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1176470588235294No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)