FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBChi185.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBChi185.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4794
Sequences flagged as poor quality0
Sequence length301
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.2920317062995411No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.2711722987067167No Hit
AGACCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.2503128911138924No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG110.229453483521068No Hit
AGACCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG110.229453483521068No Hit
AGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGCCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCCGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCGGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG100.20859407592824364No Hit
CGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG90.18773466833541927No Hit
CGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
CGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCCGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGACCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGGCCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG80.1668752607425949No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGACCGGCCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
CGGCCGGCAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
CGGCCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGTCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGACCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCCGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGCCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGCCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGACCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
CGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGTCCAGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCAGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGTCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
AGGCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG70.14601585314977056No Hit
CGTCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCCGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
CGGCCTGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCAGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCAGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGTCCGGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGTCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGTCCCGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGTCCGGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGCCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
CGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCCGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCTGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGTCCAGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCCGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGGATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT60.1251564455569462No Hit
CGCCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGGCCGGGAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCCGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
CGCCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
CGGCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
CGTCCTGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG60.1251564455569462No Hit
AGACCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGGAATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGACCGGGGATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.10429703796412182No Hit
AGACCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCAGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCGGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCAGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCCGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCCGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.10429703796412182No Hit
CGTCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGCGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCCGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCCGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGTCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCTGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.10429703796412182No Hit
CGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGTCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCTGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCCGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCCGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCTGGTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCGGCGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCGGGCATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCCGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCAGCTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCAGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCCGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.10429703796412182No Hit
AGCCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGACCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGTCCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGTCCGGCCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGGCCTGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
AGACCAGGGATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT50.10429703796412182No Hit
AGTCCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCCGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit
CGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG50.10429703796412182No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)