FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH872.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH872.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length301
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT36.666666666666667No Hit
CGGCCAGGTATGTATATCGGCTCGACCGACTCCCGCGGCCTCATGCACTG12.2222222222222223No Hit
AGGCCTGGGATGTATATTGGCGATACAGACGACGGTAGCGGTCTGCATCA12.2222222222222223No Hit
AGACCGGGAATGTATATAGGGTCAACGGGCGAGCGGGGCCTGCACCACCT12.2222222222222223No Hit
CGGCCGGGGATGTACATTGGGTCGACGGGCGAGCTCGGCCTTCACCACCT12.2222222222222223No Hit
CGGCCGGCCATGTACATCGGATCGACGGATTCCCGCGGCCTGATGCACTG12.2222222222222223No Hit
CGACCGGGTATGTACATCGGGTCAACCGGTGAGCGCGGCCTGCACCACAT12.2222222222222223No Hit
CGTCCGGGGATGTATATCGGCGACGTGGGTATTCGTGGGTTACACCACCT12.2222222222222223No Hit
CGCCCTGCAATGTATATAGGCTCGACCGGCCCCCGGGGCCTCCATCACCT12.2222222222222223No Hit
AGGCCGGGGATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.2222222222222223No Hit
AGACCTGGAATGTATATCGGATCCACGGGTCCGCGCGGTCTGCACCACCT12.2222222222222223No Hit
AGTCCAGGAATGTATATTGGCGATGTGCACGACGGCACCGGCCTGCACCA12.2222222222222223No Hit
CGCCCGGCAATGTACATCGGCTCCACCGGCGAGCGGGGTCTGCACCACCT12.2222222222222223No Hit
AGCCCCGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA12.2222222222222223No Hit
CGACCCGGGATGTACATTGGCTCGACCGGCACGCGGGGCCTGCACCACCT12.2222222222222223No Hit
AGTCCCGGTATGTATATAGGGTCGACCGATTCCCGGGGTCTCATGCACTG12.2222222222222223No Hit
CGCCCTGCAATGTATATCGGCGGCACCGGCGAACGCGCCCTGCACCATCT12.2222222222222223No Hit
AGTCCCGCCATGTATATTGGCGACACCGATGACGGTTCGGGGCTGCACCA12.2222222222222223No Hit
CGCCCGGGGATGTACATCGGCACGACTGGGCCGCGAGGGCTGCACCATTT12.2222222222222223No Hit
AGGCCGGGTATGTATATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.2222222222222223No Hit
AGCCCGGGGATGTATATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT12.2222222222222223No Hit
AGTCCGGGGATGTATATCGGCTCCACGGGCCTCGCCGGTCTGCACCACCT12.2222222222222223No Hit
CGCCCGGGTATGTATATTGGCTCGACTGGAGAGCGTGGTCTGCACCACCT12.2222222222222223No Hit
AGACCCGGTATGTATATCGGCGGCACCGACTCCCACGCCCTCCATCACCC12.2222222222222223No Hit
GATGAGTCAGCGTCGAACTATGTTGCGGTTACTCACTGTCTCTTATACAC12.2222222222222223No Hit
AGGCCAGGGATGTATATTGGGTCCACGGGCGAGCGCGGGCTGCACCACCT12.2222222222222223No Hit
AGGCCCGCGATGTACATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG12.2222222222222223No Hit
AGACCGGGAATGTACATCGGCTCGACCGGTGAGCGTGGCCTGCACCACCT12.2222222222222223No Hit
AGGCCTGGGATGTATATCGGCTCGACGGGTCTGGGCGGCTTGCACCACCT12.2222222222222223No Hit
AGTCCTGGTATGTATATTGGCGACACCGACGACGGTTCCGGCCTCCACCA12.2222222222222223No Hit
AGACCGGGTATGTACATAGGAGACACCGACGACGGGTCGGGCCTGCACCA12.2222222222222223No Hit
CGGCCAGGAATGTACATAGGCGACACCGATGACGGCTCCGGCCTGCATCA12.2222222222222223No Hit
AGGCCTGGCATGTATATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT12.2222222222222223No Hit
AGCCCAGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.2222222222222223No Hit
AGTCCAGCGATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.2222222222222223No Hit
CGGCCGGGGATGTACATCGGCGACACGGGTATCAAGGGCCTCCACCACCT12.2222222222222223No Hit
CGGCCAGGGATGTATATTGGCGGCACCGGGGTGACCGGTCTCCACCACCT12.2222222222222223No Hit
CGACCAGGAATGTACATCGGCTCGACGGGTCCTCGCGGTCTGCACCACCT12.2222222222222223No Hit
CGGCCAGCAATGTATATCGGCTCGACAGGACCGAGAGGTCTTCACCACCT12.2222222222222223No Hit
AGCCCCGGCATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA12.2222222222222223No Hit
AGGCCGGGGATGTACATTGGCTCGACGGGGGAGCGCGGCCTGCATCACCT12.2222222222222223No Hit
AGTCCAGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.2222222222222223No Hit
CGGCCGGGCATGTAAATCGGGTCGACCGATTCCCGGGGTCTCATGCACTG12.2222222222222223No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)