FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH85.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH85.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length301
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT25.128205128205128No Hit
AGGCCGGGGATGTACATTGGCGACACCTCCGACGGCACCGGCCTGCACCA12.564102564102564No Hit
CGACCCGCGATGTATATCGGGTCCACGGACTCCCGGGGCATCCTGCACTT12.564102564102564No Hit
AGGCCGGGGATGTACATAGGCTCGACCGGAGAGCGTGGTCCGCACCACCT12.564102564102564No Hit
AGGCCGGGAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
AGACCAGGAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG12.564102564102564No Hit
CGCCCGGGAATGTATATCGGCGACACCGACGACGGTTCCGGCCTCCACCA12.564102564102564No Hit
AGTCCGGGGATGTACATCGGCTCGACGGGCCCGCGCGGTCTGCACCACCT12.564102564102564No Hit
CGACCGGGTATGTATATTGGCGACACCACCTCGCGCGGCTACCACCACCT12.564102564102564No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG12.564102564102564No Hit
CGACCCGGTATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA12.564102564102564No Hit
AGACCGGGTATGTATATTGGCGACACGGATGACGGCTCGGGCCTCCACCA12.564102564102564No Hit
CGGCCCGGTATGTATATCGGGTCCACGGACTCCCGGGGCATCCTGCACCT12.564102564102564No Hit
CGGCCGGCGATGTACATCGGCGACACCTCCGACGGCACCGGCCTGCACCA12.564102564102564No Hit
CGTCCGGGGATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
AGTCCTGCTATGTATATAGGCGACACCGATGACGGCTCGGGGCTCCACCA12.564102564102564No Hit
AGACCGGCAATGTACATCGGCTCGACCGGACCGCGCGGCCTGCACCACCT12.564102564102564No Hit
AGACCCGGAATGTACATAGGATCCACCGGTCCGCGCGGTCTGCACCACCT12.564102564102564No Hit
AGGCCCGGGATGTATATCGGCTCGACCGGAAAGCGTGGTCTGCACCACCT12.564102564102564No Hit
AGACCAGCGATGTATATCGGATCCACCGACTCGCGCGGGCTCATGCACTG12.564102564102564No Hit
AGTCCCGCAATGTACATAGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
AGACCGGGAATGTACATCGGCGATGTAGGCGTGAAGGGCCTGCACCACCT12.564102564102564No Hit
CGACCGGCGATGTATATTGGCGACACCGACGATGGCTCCGGCCTCCACCA12.564102564102564No Hit
CGGCCTGCAATGTATATAGGCGATACCGACGACGGTTCCGGCCTCCACCA12.564102564102564No Hit
CGACCGGCCATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCACCA12.564102564102564No Hit
AGACCAGGTATGTATATCGGTTCCACGGGCGAACGGGGCCTGCAACACCT12.564102564102564No Hit
AGCCCAGGTATGTATATCGGTGACACCTTCGAGCGCGGGTACCACCACCT12.564102564102564No Hit
AGTCCGGGGATGTACATTGGGTCCACGGACTCCCGGGGCATCCTGCACCT12.564102564102564No Hit
CGACCGGGGATGTACATTGGCGGAACCGACGAAAAGGCGATGCACCACCT12.564102564102564No Hit
GACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG12.564102564102564No Hit
CGGCCAGCTATGTATATCGGGTCGACGGGCGAGCGCGGCCTGCACCACCT12.564102564102564No Hit
AGGCCAGGTATGTATATAGGCGACACCGACGACGGGTCCGGTCTCCACCA12.564102564102564No Hit
CGGCCTGGAATGTACATCGGCCCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
CGCCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA12.564102564102564No Hit
CGTCCAGCTATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT12.564102564102564No Hit
AGACCTGCAATGTACATCGGCAACACCGACGACGGCTCGGGCCTGCACCA12.564102564102564No Hit
AGCCCGGGGATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA12.564102564102564No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)