FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH82.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH82.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1527
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGCGATGTACATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG30.19646365422396855No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG30.19646365422396855No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.19646365422396855No Hit
AGGCCGGGTATGTATATTGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.13097576948264572No Hit
CGACCGGGTATGTATATTGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.13097576948264572No Hit
CGACCTGGTATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.13097576948264572No Hit
AGACCTGCGATGTATATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.13097576948264572No Hit
AGGCCGGGGATGTATATTGGGTCGACCGGCGAACGCGGCCTGCACCACCT20.13097576948264572No Hit
AGTCCAGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
CGGCCAGGGATGTACATCGGGTCCACCGACAGCCGCGGCGTCGGACACCT20.13097576948264572No Hit
AGGCCTGGGATGTACATTGGCGATACCGACGACGGATCGGGCCTCCACCA20.13097576948264572No Hit
AGGCCTGGTATGTATATTGGGTCCACCAGCGAGAACGGATTGCACCACCT20.13097576948264572No Hit
AGGCCGGGCATGTATATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.13097576948264572No Hit
CGCCCTGGCATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA20.13097576948264572No Hit
CGACCTGGGATGTACATTGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.13097576948264572No Hit
AGACCGGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGGCCGGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGACCTGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGACCAGGGATGTATATTGGGTCCACCGGTGAGCGGGGCCTGCACCACAT20.13097576948264572No Hit
AGTCCTGGAATGTATATTGGCTCCACGGGCGAGCGGGGCCTGCACCACCT20.13097576948264572No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGCCCTGGCATGTATATTGGATCCACGGGGCCGCGCGGTCTGCACCACCT20.13097576948264572No Hit
CGTCCGGGAATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
AGGCCAGGGATGTATATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.13097576948264572No Hit
CGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit
CGACCCGCTATGTATATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.13097576948264572No Hit
AGGCCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.13097576948264572No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)