FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH52.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH52.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length301
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT810.95890410958904No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG22.73972602739726No Hit
AGGCCGGCCATGTATATTGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
AGTCCTGGTATGTACATAGGCGACACCGACGACGGGTCGGGCCTGCATCA11.36986301369863No Hit
AGCCCTGGTATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCATCA11.36986301369863No Hit
CGACCGGGCATGTATATTGGCGACACCGACGACGGCTCGGGCCTGCGTCA11.36986301369863No Hit
AGACCTGCAATGTATATCGGCGACACCGATGACGGATCGGGCCTCCATCA11.36986301369863No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAAGTG11.36986301369863No Hit
AGACCAGGAATGTATATTGGCGACACCCCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGCCCTGGCATGTATATCGGGGACACCTCCGACGGCACCGGCCTGCACCA11.36986301369863No Hit
CGACCCGCGATGTACATCGGCGGCACCGACGAGCGCGCGTTGCATCACCT11.36986301369863No Hit
CGACCCGGAATGTATATCGGCGATACCGATGACATCACCGGCCTGCACCA11.36986301369863No Hit
CGCCCGGCGATGTATATCGGCGACACCGACGACGGCTCCGGCCTGCACCA11.36986301369863No Hit
AGTCCTGGTATGTACATCGGCTCCACCGACTCCCGCGGTCTCATGCACTG11.36986301369863No Hit
AGACCAGGAATGTACATTGGCGACACCGACGACGGTTCCGGCCTCCACCA11.36986301369863No Hit
AGGCCGGGCATGTATATTGGCGACACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
CGGCCCGCAATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
AGACCGGGGATGTACATTGGCTCCACGGGCGAGCGGGGCCTGCACCACCT11.36986301369863No Hit
AGGCCGGGGATGTACATTGGCGACACCGCCGACGGTTCCGGCCTCCACCA11.36986301369863No Hit
AGGCCTGCTATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCATCA11.36986301369863No Hit
AGGCCTGGCGATGTACATCGGCGACACCGACGACGGATCGGGCCTGCACC11.36986301369863No Hit
CGGCCTGGGATGTATATTGGCGATACCGACGACGGGTCGGGCCTCCACCA11.36986301369863No Hit
AGTCCTGGGATGTATATTGGCTCGACGGGGGAGCGCGGCCTGCACCACCT11.36986301369863No Hit
CGGCCGGGGATGTATATCGGATCGACGGGTCCGCGCGGTCTGCACCACCT11.36986301369863No Hit
AGTCCTGGTATGTATATTGGCTCGACCGGTGAGCGCGGCCTGCACCACCT11.36986301369863No Hit
AGGCCAGGGATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCATCA11.36986301369863No Hit
CGCCCGGCGATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCACCA11.36986301369863No Hit
CGTCCGGGGATGTATATCGGAGATACCGACGACGGGTCGGGCCTCCACCA11.36986301369863No Hit
CGTCCTGGTATGTATATTGGTTCCACCGACTCCCGCGGACTGATGCACTG11.36986301369863No Hit
AGCCCGGGCATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCATCA11.36986301369863No Hit
CGTCCTGCTATGTATATTGGCGGCACCGACGAGCGGGCGCTGCACCACCT11.36986301369863No Hit
CGACCGGCAATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
AGACCGGCTATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCATCA11.36986301369863No Hit
CGGCCGGGGATGTACATAGGCGACACTGGTGTAAAAGGCCTGCACCATCC11.36986301369863No Hit
AGGCCGGGTATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGCCCTGGAATGTATATTGGCGACACCGACGACGGCTCCGGCCTCCACCA11.36986301369863No Hit
CGACCGGGCATGTATATTGGCTCCACCGGCGAGCGCGGCCTGCACCACAT11.36986301369863No Hit
AGCCCTGGTATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT11.36986301369863No Hit
AGTCCTGCGATGTATATTGGCGACACCGACGACGGTTCCGGCCTCCACCA11.36986301369863No Hit
CGTCCTGGGATGTACATTGGCGACACCTCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGGCCGGCGATGTACATCGGCGACACCTCCGATGGCACCGGCCTGCATCA11.36986301369863No Hit
AGTCCAGGAATGTATATTGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
CGTCCCGCGATGTATATTGGCGACACCTCCGACGGCACCGGCCTGCACCA11.36986301369863No Hit
AGACCGGCAATGTACATCGGCGACACCGACGACGGTTCAGGCCTCCACCA11.36986301369863No Hit
CGGCCAGGAATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGTCCGGGTATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
AGCCCCGCTATGTACATCGGCGATACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
AGGCCGGGTATGTACATTGGCTCGACCGACTCGCGCGGCCTGATGCACTG11.36986301369863No Hit
CGTCCTGCGATGTACATAGGCGGCACCGACGAGAAGGCCATGCACCACCT11.36986301369863No Hit
CGTCCTGGGATGTATATTGGATCCACGGGGGTCCGAGGTCTGCACCACCT11.36986301369863No Hit
CGACCCGGGATGTATATTGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
AGGCCTGCGATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
CGACCTGGGATGTATATAGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
AGTCCGGGCATGTATATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG11.36986301369863No Hit
AGGCCAGCTATGTATATCGGCGACACCGACGACGGGTCCGGCCTCCACCA11.36986301369863No Hit
CGTCCTGGTATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA11.36986301369863No Hit
CGTCCGGCGATGTACATTGGCGACACCCCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
GATGAGTCATCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT11.36986301369863No Hit
CGACCCGGTATGTATATCGGCGATACCTCCGACGGCACGGGCCTGCATCA11.36986301369863No Hit
AGGCCTGGCATGTATATCGGCGACACCGACGACGGCTCGGGTCTGCACCA11.36986301369863No Hit
AGACCTGGGATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCACCA11.36986301369863No Hit
CGCCCAGCCATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGACCGGCGATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA11.36986301369863No Hit
AGGCCGGCGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA11.36986301369863No Hit
CGGCCGGGCATGTATATAGGCGACACCGACGACGGCTCGGGCCTGCTTCA11.36986301369863No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)