FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH31.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH31.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1060
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT70.6603773584905661No Hit
AGACCGGGTATGTATATTGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.18867924528301888No Hit
AGGCCCGGGATGTACATCGGATCCACGGGGCCGCGCGGTCTGCACCACCT20.18867924528301888No Hit
AGGCCGGGTATGTATATCGGATCCACGGGGCCGCGCGGTCTGCACCACCT20.18867924528301888No Hit
AGTCCTGCCATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.18867924528301888No Hit
AGTCCAGGAATGTACATAGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.18867924528301888No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.18867924528301888No Hit
AGACCGGGTATGTATATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.18867924528301888No Hit
CGTCCTGGAATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.18867924528301888No Hit
AGCCCGGGAATGTATATCGGATCCACGGGGCCGCGCGGTCTGCACCACCT20.18867924528301888No Hit
AGTCCCGGGATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA20.18867924528301888No Hit
AGTCCGGGTATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA20.18867924528301888No Hit
AGGCCTGCGATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.18867924528301888No Hit
AGGCCGGGTATGTACATCGGCTCCACCGGCGAGCGCGGCCTGCACCACAT20.18867924528301888No Hit
AGTCCTGGAATGTATATTGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.18867924528301888No Hit
CGGCCGGGTATGTACATCGGATCCACGGGGCCGCGCGGTCTGCACCACCT20.18867924528301888No Hit
AGACCGGGTATGTATATTGGCTCGACCGATTCGCGCGGCCTGATGCACTG20.18867924528301888No Hit
AGCCCTGGTATGTACATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.18867924528301888No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)