FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_GyrBATH16.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_GyrBATH16.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1184
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT131.097972972972973No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.2533783783783784No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.2533783783783784No Hit
AGCCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.2533783783783784No Hit
AGTCCAGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.2533783783783784No Hit
CGTCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG30.2533783783783784No Hit
AGGCCGGCGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGACCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGCCCGGGCATGTATATCGGCGGCACCGACGAGAAGGCGATGCACCACCT20.16891891891891891No Hit
CGTCCTGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGACCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGACCGGCGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCAGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCTGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGTCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCTGGTATGTACATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.16891891891891891No Hit
AGTCCCGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGCCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGTCCCGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGACCGGGCATGTATATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.16891891891891891No Hit
CGCCCGGGCATGTACATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.16891891891891891No Hit
CGCCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGTATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGTCCAGGCATGTATATTGGCGACACCTCGGACGGCACGGGCCTGCACCA20.16891891891891891No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCAGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGTCCTGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGCCCGGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGGCCAGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCTGGGATGTATATTGGATCCACGGGTCCGCGCGGTCTCCACCACCT20.16891891891891891No Hit
AGGCCAGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGCCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGCTATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGCCCAGGCATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
AGGCCCGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit
CGCCCCGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG20.16891891891891891No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)