FastQCFastQC Report
Sat 17 Feb 2024
000000000-LBY9B_l01.1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LBY9B_l01.1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10282613
Sequences flagged as poor quality0
Sequence length301
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG494541748.0949443492622No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAAC4693204.564209505891158No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAAC3962623.8537091690604326No Hit
GAGTAACAGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGTCAAC1533671.491517768878397No Hit
GAGTAACCGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGTCAAC1198111.1651804847658858No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAAC1051821.0229111997115907No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAAC901470.8766935019337982No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAAC747710.7271595264744477No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAAC636480.6189866330669062No Hit
GATAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACT389250.37855163857669255No Hit
GAGTAACAGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGATAAC345900.3363930938565908No Hit
GATAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACT328320.3192962722607571No Hit
GAGTAACCGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGATAAC276910.2692992530206087No Hit
GAGTAACAGGATTAGATACCCGGGTAGTCCACGCCCTAAACGATGCGAAC251460.24454873484006448No Hit
CTGTAAAGATAAATGGGTCATCTAAGGAGTATGGAGCTGGGATTGACTCG229370.2230658685686216No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGGCTCG222640.21652083959592763No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGGGCTGGGATTGACTCG207720.20201090909479918No Hit
GAGTAACCGGATTAGATACCCGGGTAGTCCACGCCCTAAACGATGCGAAC193620.18829844126196327No Hit
CTGTAAAGATAAATGGGTCATCTAAAGGGTATGGAGCTGGGATTGACTCG188440.1832608112354321No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATCGACTCG180410.1754515121788596No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCCGGGATTGACTCG174760.16995679989123386No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGGTTGACTCG169470.16481219316529758No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACCCG151510.14734581569879174No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTACGGAGCTGGGATTGACTCG137790.13400290373662804No Hit
ATGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG130530.12694244157589127No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGACTGACTCG129770.12620332983454693No Hit
CTTTCCCTCTCCCTTTTTCCTCTCCCTCTTCTTTCTCTTTTCTTTCCTCT115930.11274371601848673No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTGTGGAGCTGGGATTGACTCG114480.11133356861723766No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTTG113960.11082786058368628No Hit
GATAACAGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGTCAACT106650.10371877265049263No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGCATGGAGCTGGGATTGACTCG103060.10022744218808974No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)