FastQCFastQC Report
Wed 15 Nov 2023
000000000-LBVRL_l01_n02_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LBVRL_l01_n02_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461779
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA68241.4777631724266371No Hit
AAGGGTTCAGCTTTGTCAACAATGGAGGCAACAACTTTGCTGTGAACATC22130.47923357276965817No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCGTCAACGTGTAGATC11330.2453554622449267Illumina Single End PCR Primer 1 (96% over 33bp)
AGTCCCCAACGAAATCTTCGAGCGTAATCAGGAACATCGTAAGGGTACTG7320.15851738602231802No Hit
AGTCCCCAACGAAATCTTCGAGCCCAGCGTAATCAGGAACATCGTAAGGG5410.11715560906840718No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)