FastQCFastQC Report
Thu 16 Nov 2023
000000000-L9KNV_l01_n01_16.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L9KNV_l01_n01_16.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5523193
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAATCGTTAATCTCGTAT3785706.854187423832554TruSeq Adapter, Index 9 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAATCGTTAATATCGTAT104940.1899987923652134TruSeq Adapter, Index 9 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAATCGTTAATTTCGTAT61980.1122176972631592TruSeq Adapter, Index 9 (97% over 37bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)