FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSDve886.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSDve886.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length301
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT3460.71428571428571No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT712.5No Hit
CGGCTGCGTTCTTCATCGATGCTCCTTACTTCCTCTAAATGACCAAGCCC23.571428571428571No Hit
ACTCCGTGCATGCCGCCCGATACCTTGTACGCGTTGTCGTCCAACGTGTT11.7857142857142856No Hit
CGTCTGCGTTCTTCTTCGAAGCGCAAGCCAAGAGCTCCGTTGTTGAAAGT11.7857142857142856No Hit
ACACCGCGAAATCCTCCCACGAGATTGCACACGGTATCGTCCACAGGATT11.7857142857142856No Hit
ACTCCGTGAAAGCCGCCGGAGGTCTCATAGGCCTTGCCGTCGAACTTGCC11.7857142857142856No Hit
CGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT11.7857142857142856No Hit
ACCCCGTGTAGACCGCCAGAGACCTTGTAGGAGTTCTGGTCGAACTTACC11.7857142857142856No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGGAAGT11.7857142857142856No Hit
AGGCTACTTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAATT11.7857142857142856No Hit
CTTACTAACCCCGACTCGTGCTAAGATGAGTAAAGATAAAGAAGGTATTC11.7857142857142856No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT11.7857142857142856No Hit
CCGCTGCGTAGTTCATCAATGACAGAGCAAGCAGTTCCGTTGGTGATAGT11.7857142857142856No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT11.7857142857142856No Hit
CGGCTGCGTTCTTCATCGATGCGAAAACCAAGAGATCCGTTGTTGAAAGT11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)