FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSDve876.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSDve876.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11299
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT270423.9313213558722No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT233720.68324630498274No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT224019.824763253385257No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT5845.168598991061156No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT5534.894238428179485No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT3493.088768917603328No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT3473.0710682361270907No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT1341.1859456589078679No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT590.5221701035489866No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT400.3540136295247367No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC350.30976192583414464No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGATTACTTCCTCTAAATGACCAAG210.18585715550048676No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT210.18585715550048676No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT180.15930613328613152No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT180.15930613328613152No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT180.15930613328613152No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT180.15930613328613152No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT160.1416054518098947No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT160.1416054518098947No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT160.1416054518098947No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT160.1416054518098947No Hit
CGGCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCGTTGTTGAAAGT150.13275511107177626No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT150.13275511107177626No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC150.13275511107177626No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT150.13275511107177626No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT150.13275511107177626No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGTTCCGTTGTTGAAAGT140.12390477033365785No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGT140.12390477033365785No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTAAAAGT140.12390477033365785No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT140.12390477033365785No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC120.10620408885742101No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT120.10620408885742101No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT120.10620408885742101No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGT120.10620408885742101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)