FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSDve569.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSDve569.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17189
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT579733.725056722322414No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT244214.206760137297108No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT206211.99604398161615No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT14668.528710221653384No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT14618.499621851183898No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT6113.5545988713712258No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT5863.4091570190237945No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT690.40141951247891094No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT610.35487811972773287No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT550.3199720751643493No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT430.25015998603758216No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT270.157077200535226No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT270.157077200535226No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT260.15125952644132876No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT240.13962417825353424No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT240.13962417825353424No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCATTGTTGAAAGT230.133806504159637No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTCGAAAGT210.12217115597184244No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGGAAGT210.12217115597184244No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT200.1163534818779452No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT200.1163534818779452No Hit
CGGCTGCGTTCTTCATCAATGCCAGAGCCAAGAGATCCATTGTTGAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCACTGTTGAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTAAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGT190.11053580778404794No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGCTGAAAGT180.10471813369015068No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGTTCCATTGTTGAAAGT180.10471813369015068No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGC180.10471813369015068No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)