FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSDve543.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSDve543.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3951
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT172443.63452290559352No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT53313.4902556314857No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT2536.403442166540116No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT2496.302201974183751No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2045.16324981017464No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT1032.606934953176411No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT651.645153125790939No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT471.1895722601872942No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTTAAAGT330.8352315869400152No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT260.6580612503163756No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCTAGAGATCCGTTGTCAAAAGT190.480890913692736No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCTAGAGATCCGTTGTTGAAAGT190.480890913692736No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT190.480890913692736No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT130.3290306251581878No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC110.27841052898000507No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGT110.27841052898000507No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT90.22779043280182232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGT80.20248038471273097No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTCGAAAGT80.20248038471273097No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT80.20248038471273097No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTGAAAGT80.20248038471273097No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT70.1771703366236396No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT70.1771703366236396No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT70.1771703366236396No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT70.1771703366236396No Hit
CGGCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGTTCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATTGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT60.15186028853454822No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGCTCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGATACCAGAGCCAAGAGATCCGTTGTTGAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT50.12655024044545685No Hit
CGGCTGCGTTCTTCATCGGTGCCAGAACCAAGAGATCCGTTGTTGAAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAACT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGTTCCGTTGTTGAAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGTAAGT40.10124019235636549No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTATTGAAAGT40.10124019235636549No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)