FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi473.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi473.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3588
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC104829.208472686733554No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT49113.684503901895207No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT48513.517279821627648No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGACAGCGGCTGCGTTACTTCC42411.817168338907468No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCCTCTAAATGACCAAG1002.787068004459309No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC591.644370122630992No Hit
CGGCTGCGTTCTTCATCGATGCGAGATTACTTCCTCTAAATGACCAAGCC551.5328874024526198No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT501.3935340022296545No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC300.8361204013377926No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT240.6688963210702341No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTATAAATGACCAAGCCC220.6131549609810479No Hit
CGGCTGCGTTCTTCATCGATGCTGCTTACTTCCTCTAAATGACCAAGCCC190.5295429208472687No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT190.5295429208472687No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT190.5295429208472687No Hit
CGGCTGCGTTCTTCATCGATGCTTACTTCCTCTAAATGACCAAGCCCTGT130.36231884057971014No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGACAGCGGCTGCGTTCTTCAT120.33444816053511706No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGACAACGGCTGCGTTACTTCC110.30657748049052397No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGT110.30657748049052397No Hit
CGGCTGCGTTCTTCATCGATGCAAGTTACTTCCTCTAAATGACCAAGCCC110.30657748049052397No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGACAGTGGCTGCGTTACTTCC110.30657748049052397No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTGTAAATGACCAAGCCC110.30657748049052397No Hit
CGGCTGCGTTCTTTATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC90.2508361204013378No Hit
CGGCTGCGTTCTTCATCGATGCGGGTTACTTCCTCTAAATGACCAAGCCC80.2229654403567447No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT70.19509476031215162No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGACAGAGGCTGCGTTACTTCC70.19509476031215162No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATTACCAAGCCC70.19509476031215162No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAGAGT60.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGACC60.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGACCCGTTGTTAAAAGT60.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCT50.13935340022296544No Hit
CGGCTGCGTTACTTCCTCTAAATGACCAAGCCCTGTCTCTTATACACATC50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGAGGCAGCGGCTGCGTTACTTCC50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTCGTTAAAAGT50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAGGT50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTCAAAAGT50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGAGAGTTACTTCCTCTAAATGACCAAGCCC50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCTATAAGGGACAGCGGCTGCGTTACTTCC50.13935340022296544No Hit
CGGCTGCGTTCTTCATCGATGCCTGAACCAAGAGATCCGTTGTTGAAAGT40.11148272017837235No Hit
CGGCTGCGTTTTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC40.11148272017837235No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTAAAAGT40.11148272017837235No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTGAAAGT40.11148272017837235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)